miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|82784461|gb|CV856077.1|CV856077 GGGCCAAAGTCTGGCACGAGGTGTTCTCACCGCGTGTTGGGCTGCGGAGGGGCCGCCGGATTTAGACACAACGCTATGAA
TCAGGAAAAACTAGCCAAGCTTCAAGCTCAGGTCCGAATAGGAGGAAAGGGAACAGCTCGCAGAAAGAAGAAGGTGGTGC
ACAGAACAGCAACAGCTGATGACAAAAAACTTCAGAGTTCGCTCAAAAAACTGGCAGTAAATAACATTGCTGGCATTGAA
GAGGTGAACATGATAAAAGATGATGGAACGGTTATTCACTTCAACAACCCCAAGGTTCAGGCATCCCTCTCTGCTAACAC
TTTTGCAATTACTGGTCATGCAGAGGCTAAACCGATCACAGAAATGCTTCCAGGCATCTTAAGCCAGCTTGGTGCTGACA
GCTTAACAAGTCTCAGGAAGTTAGCTGAACAATTCCCAAGACAAGTGTTGGACAGTAAAGCACCAAAATCTGAAGATATT
GATGAAGAAGATGATGATGTCCCAGATCTCGTAGAAAACTTTGATGAAGCATCAAAGAATGAAGCTAACTAAATCATTAA
TAGTTCTGGAAGCTGGCATGGACTAGATTTAAGAAATCAGCTATGTGGTTCCAAAGTTTTAAAGAAACAGAGAACATCAT
CTGGTTAATAGTTCAGTAATATAAATATTTTGTATTTTTATGATACCTGTTTGTTCAGCATTTTNCTGGTCAGTTGATTT
TGCATTNTGCACTTACTCCCCAGGATCTACTCTTTTGGTCAAAACAAAAATGCCAGTGCAGNTTGAGGGGGTGTGTGCAT
GTGCGTGTGTGTATGTGTGGTGGGGTGTACATATANGTGGAGAACAAATTGGAGGACACTTTTTATTTAACCATCTTTCC
CTTTTCTTTCGAAAGAAAGAATAAAAATGAATCTCC




Most similar to sp|Q5ZJG3|BT3L4_CHICK

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5ZJG3|BT3L4_CHICK Transcription factor BTF3 homolog 4 OS=Gallus
           gallus GN=BTF3L4 PE=2 SV=1
          Length = 158

 Score =  249 bits (637), Expect = 1e-65
 Identities = 133/158 (84%), Positives = 133/158 (84%)
 Frame = +1

Query: 76  MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDXXXXXXXXXXAVNNIAGIEEVNMI 255
           MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADD          AVNNIAGIEEVNMI
Sbjct: 1   MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60

Query: 256 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 435
           KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF
Sbjct: 61  KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120

Query: 436 PRQVLDSKAPKSXXXXXXXXXXXXXXXNFDEASKNEAN 549
           PRQVLDSKAPKS               NFDEASKNEAN
Sbjct: 121 PRQVLDSKAPKSEDIDEEDDDVPDLAENFDEASKNEAN 158